People

Principal Investigator

Dr. Peter J Park

Dr. Peter J Park

Principal Investigator

Research Scientists

Elizabeth (Hye-Jung) Chun

Elizabeth (Hye-Jung) Chun

Research Associate

Dominik Glodzik

Dominik Glodzik

Instructor

Staff

Shannon Ehmsen

Shannon Ehmsen

Graphics Assistant II

Cassie Perry

Cassie Perry

Research and Administrative Coordinator

Postdoctoral Fellows

Christophe Boetto

Christophe Boetto

Research Fellow

Sangmi (Sandra) Lee

Sangmi (Sandra) Lee

Research Fellow

Kyung Ah (Kate) Woo

Kyung Ah (Kate) Woo

Research Fellow

Han (Flora) Qu

Han (Flora) Qu

Research Fellow

Corinne Sexton

Corinne Sexton

Research Fellow

Vinay Viswanadham

Vinay Viswanadham

Research Fellow

Hu Jin

Hu Jin

Research Fellow

L. Joe Luquette

L. Joe Luquette

Research Fellow

Julia Markowski

Julia Markowski

Research Fellow

Yuwei Zhang

Yuwei Zhang

Research Fellow

Students

Ann Caplin

Ann Caplin

Graduate Student

Gregory Brunette

Gregory Brunette

Graduate Student

Allen Lynch

Allen Lynch

Graduate Student

Jan Hummel

Jan Hummel

Undergraduate Student

Staff Scientists and Software Engineers

Dominika Maziec

Dominika Maziec

Software Engineer

William Ronchetti

William Ronchetti

Software Engineer

Dr. Michele Berselli

Dr. Michele Berselli

Bioinformatics Scientist

Alexander Veit

Alexander Veit

Software Engineer

Andy Schroeder

Andy Schroeder

Data Curator

Cesar Ferreyra-Mansilla

Cesar Ferreyra-Mansilla

Software Engineer

Charlotte Zhang

Charlotte Zhang

Associate Computational Biologist

Joseph Brew

Joseph Brew

Associate Computational Biologist

Michail Andreopoulos

Michail Andreopoulos

Associate Computational Biologist

Rahi Navelkar

Rahi Navelkar

Data Wrangler

Sarah Nicholson

Sarah Nicholson

Data Curator

Suhas Rao

Suhas Rao

Associate Computational Biologist

William Feng

William Feng

Associate Computational Biologist

Alumni: Research Scientists

Dana Vuzman (2020-2023) PhD in Computational Biology, Weizmann Institute of Science

Dr. Soohyun Lee (2012-2021) PhD in Bioinformatics Boston University

Dr. Burak H Alver (2010-2021) PhD in Physics Massachusetts Institute of Technology

Alumni: Staff

Joanna Lee (2019-2022) Project Coordinator (2019-2022), Senior Administrative Partner, Foundation Medicine

Anna Chung (2016-2019) BS in Psychology, Boston College

Alumni: Postdoctoral Fellows

Yoo-Jin (Jiny) Ha PhD in Biomedical Systems Informatics Yonsei University College of Medicine

Dr. Aikaterini Chatzipli (2020-2023) PhD in Genetics University of Cambridge → Postdoctoral Fellow, Boston Children’s Hospital

Dr. Ning Shen (2019-2021) PhD in Pharmacology & Certificate in Computational Biology Duke University

Dr. Yu-Han Huang (2018-2021) PhD in Pharmacology Taipei Medical University (Taiwan)

Dr. Yanmei Dou (2017-2021) PhD in Bioinformatics Peking University (China)

Dr. Jinkuk Kim (2017-2020) PhD in Bioinformatics and Integrative Genomics MIT

Dr. Jake (June-Koo) Lee PhD in Medical Science and Engineering Korea Advanced Institute of Science and Technology

Dr. Giorgio Melloni (2017-2019) PhD in Computational Biology Istituto Italiano di Tecnologia (Italy)

Doga Gulhan (2017-2024) PhD in Physics Massachusetts Institute of Technology

Craig Bohrson (2017-2022) PhD HMS Bioinformatics and Integrative Genomics (BIG)

Dr. Vincent (Eun-Cheon) Lim (2016-2017) PhD in Bioinformatics Max-Planck Institute for Developmental Biology

Dr. Tiziana Sanavia (2016-2022) PhD. in Bioengineering University of Padova (Italy)

Dr. Su Wang (2016-2019) PhD in Bioinformatics Tongji University

Dr. Isidro Cortes Ciriano (2016-2020) PhD in Bioinformatics Institut Pasteur Paris (France)

Dr. Geoff Nelson (2016-2022) PhD in Bioinformatics MRC Laboratory of Molecular Biology

Dr. Dhawal Jain (2016-2020) PhD in chromatin dynamics Ludwig Maximilians University (Max-Planck research school)

Dr. Youngsook Lucy Jung (2015-2021) PhD in Health Sciences and Technology Massachusetts Institute of Technology

Dr. Scott P Kallgren (2015-2017) PhD in Yeast Chromatin Biology Columbia University

Dr. Jia Wang (2015-2017) PhD in Neuroscience Institute of Neuroscience

Dr. Minseok (Daniel) Kwon (2015-2020) PhD in Bioinformatics Seoul National University

Dr. Semin Lee (2011-2016) PhD in Biochemistry University of Cambridge

Dr. Lixing Yang (2010-2017) PhD in Genetics University of Georgia

Dr. Eunjung (Alice) Lee PhD in Bioinformatics KAIST

Dr. Andrew Wei Xu PhD University of Ottawa Postdoctoral Fellow (2011-2014)

Dr. Francesco Ferrari PhD in Molecular Biology/Bioinformatics University of Modena and Reggio Emilia

Dr. Huiling Xue PhD in Bioinformatics Chinese Academy of Sciences

Dr. Hyunju Lee PhD in Computer Science University of Southern California

Dr. Hyunsoo Kim PhD University of Minnesota Twin Cities

Dr. Joshua WK Ho PhD in Bioinformatics University of Sydney

Dr. Mikaela Keller PhD Ecole Polytechnique Fédérale de Lausanne Postdoctoral Fellow (2009-2010

Dr. Michael Tolstorukov PhD V. Karazin Kharkov National University

Dr. Nils Gehlenborg PhD in Bioinformatics University of Cambridge and European Bioinformatics Institute

Dr. Peter V Kharchenko PhD in Biophysics Harvard University

Dr. Ruibin Xi PhD in Statistics Washington University in St. Louis

Dr. Shouyong Peng PhD in Physics Boston University

Dr. Simon (Chong) Chu PhD in Computer Science and Engineering University of Connecticut

Dr. Tae-min Kim MD in Medicine and PhD in Microbiology The Catholic University of Korea

Dr. Viktor Ljungström PhD in Medical Genetics Uppsala University (Sweden)

Alumni: Students

Teng Gao (2022-2024) PhD student Bioinformatics and Integrative Genomics (BIG) (2022-2024)

Nina Xiong (2022-2022) Master of Biomedical Informatics (2022)

Catherine Song (2022-2022) Master of Biomedical Informatics (2022)

Courtney Lau (2021-2021) Undergraduate Student (UCLA), Summer Intern (2021)

Colin Miller (2020-2020) Undergraduate at Washington University in St. Louis: Computer Science Major, Summer Intern (2020)

Lawrence Huang (2019-2019) Undergradute Student, Brown University, Summer Intern (2019)

Ethan Oliver (2019-2019) Undergradute Student, Tufts University, Summer Intern (2019)

Heather Gold (2018-2020) PhD student Bioinformatics and Integrative Genomics (BIG) (2017-2020)

David Geng (2018-2018) Undergraduate at Duke University; Math, Computer Science, Chemistry, Undergraduate Researcher (2018)

Anuraag Gopaluni (2018-2018) Undergraduate Student at Boston University; Mathematics and Statistics, Computer Science, Undergraduate Researcher (2018)

Rebecca Panitch (2017-2017) Summer Intern (DBMI Summer Institute) (2017), Undergraduate student at Brandeis University, Neuroscience and Biology

Jennifer Walsh (2017-2017) Undergraduate (Physics), Harvard College, Undergraduate Researcher (2017)

Danielle Rubin (2017-2017) Summer Intern (Harvard DBMI Summer Institute) (2017), Undergraduate student at the University of Chicago, Biology

Connor Horton (2017-2018) Harvard College undergraduate (Molecular and Cellular Biology), Undergraduate Researcher (2017-2018)

Fritz Lekschas (2015-2016) PhD student Computer Science

Anton Xue High School/Undergraduate Student (Boston Latin School/Princeton, 2014-2015)

Basheer Becerra Rotation Student

Beverly Fu Undergraduate Researcher, Harvard College

Chris Nam PhD student Department of Systems Biology

Christopher Palmer Summer intern (MIT UROP, 2005-2006)

Dr. Daniel S Day PhD in Bioinformatics Integrative Genomics Massachusetts Institute of Technology

Daniel Fridman PhD student Bioinformatics and Integrative Genomics (BIG)

Daniel Lee PhD Student Bioinformatics and Integrative Genomics (BIG)

Daniel Stein PhD student Bioinformatics and Integrative Genomics (BIG)

Daon Ha Summer intern (MIT UROP, 2005-2006)

Dr. Eric Bishop PhD in Bioinformatics Boston University

Fan Yang Summer intern (MIT UROP, 2005-2006)

Jayoung Ryu Rotation Student

Jeewon (Grace) Hwang Master's student, Computational Science and Engineering, School of Engineering & Applied Sciences

Jeremy Liu Summer Intern (Yale, 2014)

Joshua Cook PhD student Biological and Biomedical Sciences (BBS)

Julie Yoo MBA, MS/MBA Student (2007-2008)

Kamil Slowikowski Rotation Student

Kathy Ye Summer intern (MIT UROP, 2005-2006)

Lily Wang Rotation Student

Ling-Ya (Monica) Chao Harvard Undergraduate Researcher (2014-2015)

Lucy Y Liu Summer Intern (Wellesley, 2011)

Matthew Salesi BS Princeton University, Summer student (2009)

MinJeong Ahn Summer intern (MIT UROP, 2005-2006)

Nathan Clement BS Brigham Young University, Summer student (2009)

Nathan Joel Nakatsuka Rotation Student

Niklas Engel Visiting Research Fellow (2023-2025)

Niklas Smedemark-Margulies Graduate student in immunology (2014-2015)

Rebeca Borges Monroy Rotation Student

Dr. Richard Park PhD in Bioinformatics Boston University

Sheila Gaynor Rotation Student (2014)

Sidi Zhang Rotation Student (2013)

Songzi Du Summer intern (MIT UROP, 2005-2006)

Tilly Rigby Master's student, Biomedical Informatics

Wafa Malik Graduate Student, Biological & Biomedical Sciences program (HMS), G1, Graduate Student, Hata Lab

Yifan Zhao PhD student Health Science & Technology (HST) at MIT

Yixuan He Summer Intern (DBMI HST Summer Institute) (2017), Undergraduate student at Dartmouth University, Biology and Math

Alumni: Staff Scientists and Software Engineers

Benedikt Geiger (2022-2024) Associate Computational Biologist (2022-2024)

Tae Hee Clara Kim Undergraduate Researcher, Wellesley College (2021-2023), Jr Scientific Programmer (2023-2025)

Dr. Phil Grayson (2021-2022) PhD in Organismic and Evolutionary Biology Harvard University

Dr. Doug Rioux (2021-2024) Data Curator (2021-2024)

Antuan Tran (2021-2023) Jr. Scientific Programmer (2021-2023), Medical School Student, Mayo Clinic Alix School of Medicine

Eric Berg (2020-2021) Cloud Software Engineer for the Clinical Genomics Analysis Platform (CGAP) (2020-2021)

Victor Mao (2019-2021) Scientific Programmer (2019-2021), Machine Learning Software Engineer, Google

Kent Pitman (2019-2023) Lead Senior Software Developer for the Clinical Genomics Analysis Platform (CGAP) (2019-2023)

Clara Bakker (2019-2025) Jr. Scientific Programmer, 4D Nucleome DCIC (2019-2025)

Bianca Morris (2019-2025) ALM
Sr. Front End Engineer

Dr. Andrea Cosolo (2019-2023) PhD in Biology Ludwig Maximilians University and IMPRS-LS

Sarah Reiff (2018-2022) Data Curator (2018-2022), GSK, Senior Scientific Knowledge Engineer

Luisa Mercado (2018-2021) Assistant Data Curator, 4DN Nucleome DCIC (2018-2021), Teaching Assistant, Simon Fraser University

Alon Galor (2017-2021) PhD student University of Oxford

Maxwell Sherman (2016-2018) PhD Student Computer Science and Aritificial Intelligence Laboratory

Koray Kirli (2016-2022) Data Curator (2016-2020), 4D Nucleome DCIC, Technical Coordinator, GHGA

Jeremy Johnson (2016-2019) Software Development Lead (2016-2019), 4D Nucleome DCIC

Chad Serrant (2016-2019) Senior Software Developer (2016-2019), Software Engineer, VMware Tanzu Labs

Carl Vitzthum (2016-2020) Senior Software Developer (2016-2020), 4D Nucleome DCIC, Senior Software Engineer, Seres Therapeutics

Alison Barton (2016-2017) PhD Student Bioinformatics and Integrative Genomics (BIG)

Alex Balashov (2016-2022) Senior Software Developer (2016-2022), 4D Nucleome DCIC

Scott Ouellette (2015-2019) BS in Computer Science, Wentworth Institute of Technology, Software Developer (2015-2019)

Jennifer Marx (2015-2016) MEng in Electrical Engineering, Boston University, Lead Software Developer (2015-2019)

David Michaels Software Engineer

Geehoon Hong MS in Mathematics, Georgia Institute of Technology, Research Assistant (2009-2010), Data Analyst, TrackMan

Jonathan Dreyfuss MS, Bioinformatics Analyst (2006-2008), Director, Bioinformatics & Biostatistics Core Instructor in Medicine, Harvard Medical School

Psalm Haseley MS in Bioinformatics, Rochester Institute of Technology, Programmer (2010-2015)

Richard Kim HPCGG Bioinformatics Analyst (2003-2005)

Vidhu Choudhary MA, Bioinformatics Programmer (2007-2008), Senior Data Consultant, Kaiser Permanente

Dr. Weil R Lai MD Tufts University School of Medicine, HPCGG Bioinformatics Analyst (2004-2007), Urologist, Hunterdon Medical Center

Alumni: Visiting Scholars

Onur Baloglu (2018-2019) Research Assistant and PhD Candidate at METU Ankara

Jumanah Alshenaifi (2016-2016) (2016)

Dr. Alexander Lex PhD in Computer Science Graz University of Technology

Guidantonio Malagoli Tagliazucchi Visiting graduate student (2012)

Jae Won Yun Visiting graduate student (2014)

Dr. Luca Petiti PhD in Genome Sciences/Genomics UniversitĂ  degli Studi di Milano

Dr. Marc Streit PhD in Computer Science Graz University of Technology

Dr. Mattia Forcato PhD in Science and Technologies for Health Products University of Modena and Reggio Emilia

Yoo-Na Kim Assistant Clinical Research Professor, Yonsei University College of Medicine (2023-2024)