Principal Investigator

Research Scientists

Burak H Alver

Dr. Burak H Alver

PhD in Physics, Massachusetts Institute of Technology
Scientific Project Manager for 4D Nucleome DCIC
Soohyun Lee

Dr. Soohyun Lee

PhD in Bioinformatics, Boston University
Senior Bioinformatics Scientist

Project Coordinator

Postdoctoral Fellows

Isidro Cortes Ciriano

Dr. Isidro Cortes Ciriano

PhD in Bioinformatics, Institut Pasteur Paris (France)
Marie Curie Fellow (Individual Global Fellowship)
Dhawal Jain

Dr. Dhawal Jain

​PhD in chromatin dynamics, Ludwig Maximilians University (Max-Planck research school), Munich (Germany)​
June-Koo Lee

Dr. Jake (June-Koo) Lee

PhD in Medical Science and Engineering, Korea Advanced Institute of Science and Technology
MD, Seoul National University


Craig Bohrson

Craig Bohrson

PhD student, Bioinformatics and Integrative Genomics (BIG)

Heather Gold

PhD student, Bioinformatics and Integrative Genomics (BIG)

Yixuan He

Summer Intern (DBMI HST Summer Institute)

Connor Horton

Harvard College undergraduate (Molecular and Cellular Biology)
Fritz Lekschas

Fritz Lekschas

PhD student, Computer Science, School of Engineering & Applied Sciences
L. Joe Luquette

L. Joe Luquette

PhD student, Bioinformatics and Integrative Genomics (BIG)
Scientific Programmer (2009-2014)

Software Engineers and Programmers

Alison Barton

Alison Barton

MPhil in Biological Science (Genetics), University of Cambridge

Alumni: Postdoctoral Fellows and Graduate Students

Semin Lee

Dr. Semin Lee

PhD in Biochemistry, University of Cambridge
Assistant Professor, Ulsan National Institute of Science and Technology, South Korea
Eunjung (Alice) Lee

Dr. Eunjung (Alice) Lee

Postdoctoral Fellow (2010-2013) / Instructor (2013-2016)
Assistant Professor, Harvard Medical School
Division of Genetics and Genomics, Boston Children's Hospital
Nils Gehlenborg

Dr. Nils Gehlenborg

PhD in Bioinformatics, University of Cambridge and European Bioinformatics Institute
Postdoctoral Fellow (2010-2015)
Assistant Professor at Department of Biomedical Informatics, Harvard Medical School
Daniel S Day

Dr. Daniel S Day

PhD in Bioinformatics Integrative Genomics, Massachusetts Institute of Technology
Graduate Student (2009-2014)
Postdoctoral Researcher at Rick Young Lab, Whitehead Institute
Jia Wang

Dr. Jia Wang

PhD in Neuroscience, Institute of Neuroscience, Chinese Academy of Sciences
Michael Tolstorukov

Dr. Michael Tolstorukov

PhD, V. Karazin Kharkov National University
Postdoctoral Fellow/Instructor (2007-2012)
Departmental Fellow in Molecular Biology Department, Massachusetts General Hospital
Francesco Ferrari

Dr. Francesco Ferrari

PhD in Molecular Biology/Bioinformatics, University of Modena and Reggio Emilia
Postdoctoral Fellow (2010-2014)
Richard Park

Dr. Richard Park

PhD in Bioinformatics, Boston University
Graduate student (2009-2014)
Huiling Xue

Dr. Huiling Xue

PhD in Bioinformatics, Chinese Academy of Sciences
Postdoctoral Fellow (2012-2013)
Joshua WK Ho

Dr. Joshua WK Ho

PhD in Bioinformatics, University of Sydney
Postdoctoral Fellow (2010-2013)
Laboratory Head of the Bioinformatics and Systems Medicine Laboratory, Victor Chang Cardiac Research Institute
Tae-min Kim

Dr. Tae-min Kim

MD in Medicine and PhD in Microbiology, The Catholic University of Korea
Postdoctoral Fellow (2008-2012)
Eric Bishop

Dr. Eric Bishop

PhD in Bioinformatics, Boston University
Graduate student (2008-2012)
Ruibin Xi

Dr. Ruibin Xi

PhD in Statistics, Washington University in St. Louis
Postdoctoral Fellow (2009-2012)
Assistant Professor, School of Mathematical Sciences and Center for Statistical Science, Peking University
Peter V Kharchenko

Dr. Peter V Kharchenko

PhD in Biophysics, Harvard University
Postdoctoral Fellow/Instructor (2006-2011)
Assistant Professor of Biomedical Informatics, Harvard Medical School
Shouyong Peng

Dr. Shouyong Peng

PhD in Physics, Boston University
Postdoctoral Fellow (2005-2010)
Staff Scientist, Broad Institute/Dana-Farber Cancer Institute
Mikaela Keller

Dr. Mikaela Keller

PhD Ecole Polytechnique Fédérale de Lausanne
Postdoctoral Fellow (2009-2010, joint with John Brownstein)
Hyunsoo Kim

Dr. Hyunsoo Kim

PhD University of Minnesota, Twin Cities
Postdoctoral Fellow (2007-2009)
Assistant Professor, University of Alabama Birmingham
Hyunju Lee

Dr. Hyunju Lee

PhD in Computer Science, University of Southern California
Postdoctoral Fellow (2006-2007)
Associate Professor, Gwangju Institute of Science and Technology
Chris Nam

Chris Nam

PhD student, Department of Systems Biology
Joint with Jeremy Gunawardena
Jeewon (Grace) Hwang

Jeewon (Grace) Hwang

Master's student, Computational Science and Engineering, School of Engineering & Applied Sciences

Alumni: Programmers and Software Engineers

Psalm Haseley

Psalm Haseley

MS in Bioinformatics, Rochester Institute of Technology
Programmer (2010-2015)
Geehoon  Hong

Geehoon Hong

MS in Mathematics, Georgia Institute of Technology
Research Assistant (2009-2010)
Weil R Lai

Dr. Weil R Lai

MD Tufts University School of Medicine
HPCGG Bioinformatics Analyst (2004-2007)

Alumni: Visiting Scholars

Mattia Forcato

Dr. Mattia Forcato

PhD in Science and Technologies for Health Products, University of Modena and Reggio Emilia
Visitor (2014)
Research Assistant Professor, Center for Genome Research, Department of Life Sciences, University of Modena and Reggio Emilia
Alexander Lex

Dr. Alexander Lex

PhD in Computer Science, Graz University of Technology
Visiting graduate student (2011)
Assistant Professor of Computer Science, Scientific Computing and Imaging Institute and School of Computing, University of Utah
Luca Petiti

Dr. Luca Petiti

PhD in Genome Sciences/Genomics, Università degli Studi di Milano
Visiting graduate student (2013-2014)
Postdoctoral Fellow at the National Research Council - Institute of Biomedical Technologies
Marc Streit

Dr. Marc Streit

PhD in Computer Science, Graz University of Technology
Visitor (2012)
Assistant Professor, Institute of Computer Graphics, Johannes Kepler University

Alumni: Rotation Students and Undergraduate Students

Songzi Du

Songzi Du

Summer intern (MIT UROP, 2005-2006)
Daon Ha

Daon Ha

Summer intern (MIT UROP, 2005-2006)
Anton Xue

Anton Xue

High School/Undergraduate Student (Boston Latin School/Princeton, 2014-2015))
Fan Yang

Fan Yang

Summer intern (MIT UROP, 2005-2006)
Kathy Ye

Kathy Ye

Summer intern (MIT UROP, 2005-2006)