Please direct your questions to Peter J. Park.
R package: sigPathway
Implemented by Weil R. Lai
The latest version is available from the Bioconductor website: http://www.bioconductor.org/packages/release/bioc/html/sigPathway.html
| Version | Package (Windows) | Source Code | Help | Comment | Date |
| 1.1-0 | sigPathway_1.1-0.zip | sigPathway_1.1-0.tar.gz | sigPathway.pdf | Sep. 2005 | |
| 1.1-1 | sigPathway_1.1-1.zip | sigPathway_1.1-1.tar.gz | a bug for the continuous phenotype case is fixed | Dec. 2005 | |
| 1.1-2 | sigPathway_1.1-2.zip | sigPathway_1.1-2.tar.gz | a memory allocation routine was modified | Feb. 2006 | |
| 1.1-3 | sigPathway_1.1-3.zip | sigPathway_1.1-3.tar.gz | sigpathway-1.1-3.manual.pdf | a minor bug for the weights w_{ki} option fixed | Mar. 2006 |
| 1.1-4 | sigPathway_1.1-4.zip | sigPathway_1.1-4.tar.gz | minor bugs for permutations; for small samples, all possible permutations are now performed | Apr. 2006 |
*For compiling on non-Windows platforms, please type, “R CMD INSTALL
Expression Data
Gene sets (R object)
For other array types, Entrez Gene IDs can be used as identifiers: Genesets_EntrezGeneIDs (all species, 3MB)