Please direct your questions to Peter J. Park.
- HindIII resctriction fragments in mm9 genome assembly are defined as the genomic region between two consecutive HindIII restriction site. The start/end coordinates are the midlle position within the HindIII restriction sites.
- Read counts per fragments are reads mapped at either the 5'-end or 3'-end of the HindIII fragment. Reads at bait fragments and other potential outliers have been excluded, as described in the article.
- Read counts per gene are obtained by summing read counts at individual fragments overlapping the gene locus or a 20kb window upstream the annotated transcription start site.
- Fragments annotations are reported as RefSeq genes where the fragment is overlapping either the gene body or a 20kb window upstream or downstream the annotated gene coordinates.
|Annotations for HindIII fragments||10.08 MB|
|Datamatrix of fragment level read counts||9.34 MB|
|Datamatrix of gene level read counts||526 KB|
|List of m4C-seq samples||1 KB|